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danio rerio (zebrafish) oligo microarray v3  (Agilent technologies)


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    Structured Review

    Agilent technologies danio rerio (zebrafish) oligo microarray v3

    Danio Rerio (Zebrafish) Oligo Microarray V3, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/danio+rerio+(zebrafish)+oligo+microarray+v3/pmc09938149-62-23-31
    Average 90 stars, based on 1 article reviews
    danio rerio (zebrafish) oligo microarray v3 - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages"

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages

    Journal: Data in Brief

    doi: 10.1016/j.dib.2023.108967


    Figure Legend Snippet:

    Techniques Used: DNA Methylation Assay, Labeling, Microarray, Hybridization, Expressing

    Related Articles

    Labeling:

    Article Title: Functional Genomics of Epileptogenesis in Animal Models and Humans.
    Article Snippet: It has been estimated that epilepsies are among the top five neurological diseases with the highest burden of disease.. In recent years, genome-wide expression studies (GWES) have been carried out in experimental models of epilepsy and in samples from human patients.. In this study, I carried out meta-analyses and analyses of convergence for available GWES for epileptogenesis in humans and in mouse, rat, zebrafish and fruit fly models.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Article Title: Retinoic acid receptors' expression and function during zebrafish early development.
    Article Snippet: Retinoic acid (RA) regulates many developmental processes through its binding to two types of nuclear receptors, the retinoic acid receptor (RAR), and the retinoid-X receptor (RXR), which preferentially binds to the 9-cis isomer.. Here we analyzed the RAR/RXR regulatory system during the first 5 days of development of zebrafish.. Analysis of the relative transcript abundances for the four RAR and the six RXR zebrafish genes present in the zebrafish genome indicates a transition from maternal to embryonic transcripts during the first 24 h post fertilization.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: How the data were acquired , Cyanine-3 (Cy3) labeled cRNA was prepared and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent). After hybridization, slides were scanned on the Agilent SureScan Microarray Scanner (G2600D) using one color scan setting for array slides (Scan Area 61 × 21.6 mm, Scan resolution 3 μm, Dye channel was set to Green, and Green PMT was set to 100%.)..

    Microarray:

    Article Title: Functional Genomics of Epileptogenesis in Animal Models and Humans.
    Article Snippet: It has been estimated that epilepsies are among the top five neurological diseases with the highest burden of disease.. In recent years, genome-wide expression studies (GWES) have been carried out in experimental models of epilepsy and in samples from human patients.. In this study, I carried out meta-analyses and analyses of convergence for available GWES for epileptogenesis in humans and in mouse, rat, zebrafish and fruit fly models.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Article Title: Retinoic acid receptors' expression and function during zebrafish early development.
    Article Snippet: Retinoic acid (RA) regulates many developmental processes through its binding to two types of nuclear receptors, the retinoic acid receptor (RAR), and the retinoid-X receptor (RXR), which preferentially binds to the 9-cis isomer.. Here we analyzed the RAR/RXR regulatory system during the first 5 days of development of zebrafish.. Analysis of the relative transcript abundances for the four RAR and the six RXR zebrafish genes present in the zebrafish genome indicates a transition from maternal to embryonic transcripts during the first 24 h post fertilization.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: How the data were acquired , Cyanine-3 (Cy3) labeled cRNA was prepared and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent). After hybridization, slides were scanned on the Agilent SureScan Microarray Scanner (G2600D) using one color scan setting for array slides (Scan Area 61 × 21.6 mm, Scan resolution 3 μm, Dye channel was set to Green, and Green PMT was set to 100%.)..

    Hybridization:

    Article Title: Functional Genomics of Epileptogenesis in Animal Models and Humans.
    Article Snippet: It has been estimated that epilepsies are among the top five neurological diseases with the highest burden of disease.. In recent years, genome-wide expression studies (GWES) have been carried out in experimental models of epilepsy and in samples from human patients.. In this study, I carried out meta-analyses and analyses of convergence for available GWES for epileptogenesis in humans and in mouse, rat, zebrafish and fruit fly models.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Article Title: Retinoic acid receptors' expression and function during zebrafish early development.
    Article Snippet: Retinoic acid (RA) regulates many developmental processes through its binding to two types of nuclear receptors, the retinoic acid receptor (RAR), and the retinoid-X receptor (RXR), which preferentially binds to the 9-cis isomer.. Here we analyzed the RAR/RXR regulatory system during the first 5 days of development of zebrafish.. Analysis of the relative transcript abundances for the four RAR and the six RXR zebrafish genes present in the zebrafish genome indicates a transition from maternal to embryonic transcripts during the first 24 h post fertilization.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: How the data were acquired , Cyanine-3 (Cy3) labeled cRNA was prepared and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent). After hybridization, slides were scanned on the Agilent SureScan Microarray Scanner (G2600D) using one color scan setting for array slides (Scan Area 61 × 21.6 mm, Scan resolution 3 μm, Dye channel was set to Green, and Green PMT was set to 100%.)..

    DNA Methylation Assay:

    Article Title: Functional Genomics of Epileptogenesis in Animal Models and Humans.
    Article Snippet: It has been estimated that epilepsies are among the top five neurological diseases with the highest burden of disease.. In recent years, genome-wide expression studies (GWES) have been carried out in experimental models of epilepsy and in samples from human patients.. In this study, I carried out meta-analyses and analyses of convergence for available GWES for epileptogenesis in humans and in mouse, rat, zebrafish and fruit fly models.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Article Title: Retinoic acid receptors' expression and function during zebrafish early development.
    Article Snippet: Retinoic acid (RA) regulates many developmental processes through its binding to two types of nuclear receptors, the retinoic acid receptor (RAR), and the retinoid-X receptor (RXR), which preferentially binds to the 9-cis isomer.. Here we analyzed the RAR/RXR regulatory system during the first 5 days of development of zebrafish.. Analysis of the relative transcript abundances for the four RAR and the six RXR zebrafish genes present in the zebrafish genome indicates a transition from maternal to embryonic transcripts during the first 24 h post fertilization.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: How the data were acquired , Cyanine-3 (Cy3) labeled cRNA was prepared and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent). After hybridization, slides were scanned on the Agilent SureScan Microarray Scanner (G2600D) using one color scan setting for array slides (Scan Area 61 × 21.6 mm, Scan resolution 3 μm, Dye channel was set to Green, and Green PMT was set to 100%.)..

    Expressing:

    Article Title: Functional Genomics of Epileptogenesis in Animal Models and Humans.
    Article Snippet: It has been estimated that epilepsies are among the top five neurological diseases with the highest burden of disease.. In recent years, genome-wide expression studies (GWES) have been carried out in experimental models of epilepsy and in samples from human patients.. In this study, I carried out meta-analyses and analyses of convergence for available GWES for epileptogenesis in humans and in mouse, rat, zebrafish and fruit fly models.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Article Title: Retinoic acid receptors' expression and function during zebrafish early development.
    Article Snippet: Retinoic acid (RA) regulates many developmental processes through its binding to two types of nuclear receptors, the retinoic acid receptor (RAR), and the retinoid-X receptor (RXR), which preferentially binds to the 9-cis isomer.. Here we analyzed the RAR/RXR regulatory system during the first 5 days of development of zebrafish.. Analysis of the relative transcript abundances for the four RAR and the six RXR zebrafish genes present in the zebrafish genome indicates a transition from maternal to embryonic transcripts during the first 24 h post fertilization.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: How the data were acquired , Cyanine-3 (Cy3) labeled cRNA was prepared and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent). After hybridization, slides were scanned on the Agilent SureScan Microarray Scanner (G2600D) using one color scan setting for array slides (Scan Area 61 × 21.6 mm, Scan resolution 3 μm, Dye channel was set to Green, and Green PMT was set to 100%.)..

    Mutagenesis:

    Article Title: Functional Genomics of Epileptogenesis in Animal Models and Humans.
    Article Snippet: It has been estimated that epilepsies are among the top five neurological diseases with the highest burden of disease.. In recent years, genome-wide expression studies (GWES) have been carried out in experimental models of epilepsy and in samples from human patients.. In this study, I carried out meta-analyses and analyses of convergence for available GWES for epileptogenesis in humans and in mouse, rat, zebrafish and fruit fly models.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Article Title: Retinoic acid receptors' expression and function during zebrafish early development.
    Article Snippet: Retinoic acid (RA) regulates many developmental processes through its binding to two types of nuclear receptors, the retinoic acid receptor (RAR), and the retinoid-X receptor (RXR), which preferentially binds to the 9-cis isomer.. Here we analyzed the RAR/RXR regulatory system during the first 5 days of development of zebrafish.. Analysis of the relative transcript abundances for the four RAR and the six RXR zebrafish genes present in the zebrafish genome indicates a transition from maternal to embryonic transcripts during the first 24 h post fertilization.

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages
    Article Snippet: How the data were acquired , Cyanine-3 (Cy3) labeled cRNA was prepared and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent). After hybridization, slides were scanned on the Agilent SureScan Microarray Scanner (G2600D) using one color scan setting for array slides (Scan Area 61 × 21.6 mm, Scan resolution 3 μm, Dye channel was set to Green, and Green PMT was set to 100%.)..



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    Agilent technologies danio rerio (zebrafish) oligo microarray v3

    Danio Rerio (Zebrafish) Oligo Microarray V3, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/danio+rerio+(zebrafish)+oligo+microarray+v3/pmc09938149-62-23-31
    Average 90 stars, based on 1 article reviews
    danio rerio (zebrafish) oligo microarray v3 - by Bioz Stars, 2026-09
    90/100 stars
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    Journal: Data in Brief

    Article Title: Microarray transcriptome datasets of maternal-zygotic DNA methyltransferase 3aa −/− zebrafish during early developmental stages

    doi: 10.1016/j.dib.2023.108967

    Figure Lengend Snippet:

    Article Snippet: Upon completion of the fragmentation reaction, 25 μl of 2 × Agilent hybridization buffer was added to the fragmentation mixture and hybridized to Danio rerio (Zebrafish) Oligo Microarray V3 (Design ID: Agilent-026,437) (Agilent) for 17 h at 65 °C in a rotating Agilent hybridization oven.

    Techniques: DNA Methylation Assay, Labeling, Microarray, Hybridization, Expressing